Thomas L. Casavant
Roy J. Carver, Jr. Chair in Bioinformatics and Computational Biology
Professor
Electrical and Computer Engineering
Professor
Biomedical Engineering
Professor
Ophthalmology and Visual Sciences
Director
Center for Bioinformatics and Computational Biology
5316 Seamans Center for the Engineering Arts and Sciences
The University of Iowa
Iowa City, IA 52242-1527
Telephone: (319) 335-5953
Joined the College of Engineering: 1989
Education: Ph.D., Electrical Engineering,
University of Iowa, 1986
M.S., Electrical Engineering, University of Iowa, 1983
B.S., C.S., University of Iowa, 1982
Special Fields of Knowledge: Bioinformatics, computational biology, genome sequence analysis, software tools for human disease mutation identification, computer architecture; parallel processing; distributed computing; software engineering..
Present Research Interests:Bioinformatics, computational biology, genome sequence analysis, software tools for human disease mutation identification, computer architecture; parallel processing; distributed computing; software engineering.
Selected Publications:
- Braun, T., Scheetz, T., Webster, G., Clark, A., Stone, E., Sheffield, V., and Casavant, T., "Identifying Candidate Disease Genes with High-Performance Computing, " Supercomputing, Vol. 26, pp. 7-24, 2003.
- Tuggle, C.K., Gree, J.A., ... Casavant, T.L., et. al., "EST-Based Gene Discovery in Pig: Virtual Expression Patterns and Comparative Mapping to Human." Mammalian Genome, Vol. 14, pp. 565-579, 2003.
- Chiang, A.P., Nishimura, D., ... Casavant, T., et. al., "Comparative Genomic Analysis Identifies an ADP=Ribosylation Factor-like Gene as the Cause of Bardet-Biedl Syndrome (BBS3)," Am. J. Hum. Genet., Vol. 75, pp. 475-484, 2004.
- Stone, E.M., Braun, T.A., Russell, S.R., Kuehn, M., Lotery, A.J., Moor, P.A., Eastman, C.G., Casavant, T.L., and Sheffield. V.C., "Missense Varation in the Fibulin 5 Gene and Age-Related Macular Degeneration," New England Journal of Medicine, Vol 351, pp. 346-353, 2004.
- Hackett, J.D., Scheetz, T.E., Yoon, H.S., Soares, M.B., Bonaldo. M.F., Casavant, T.L., and Bhattacharya, D., "Insights in to a Dinoflagellate Genome Through Expressed SEquence Tag Analysis," BMC Genomics, Vol. 6(1), p. 80, May 29, 2005.
Active Scientific and Professional Society Memberships: Institute of Electrical and Electronical Engineers Computer Society; Association for Computer Machinery.