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Thomas L. Casavant

tom-casavant@uiowa.edu

Photo of Tom CasavantRoy J. Carver, Jr. Chair in Bioinformatics and Computational Biology

Professor
Electrical and Computer Engineering

Professor
Biomedical Engineering

Professor
Ophthalmology and Visual Sciences

Director
Center for Bioinformatics and Computational Biology

5316 Seamans Center for the Engineering Arts and Sciences
The University of Iowa
Iowa City, IA 52242-1527
Telephone: (319) 335-5953

Personal Web Page

Joined the College of Engineering: 1989 

Education: Ph.D., Electrical Engineering, University of Iowa, 1986 
M.S., Electrical Engineering, University of Iowa, 1983 
B.S., C.S., University of Iowa, 1982 

Special Fields of Knowledge: Bioinformatics, computational biology, genome sequence analysis, software tools for human disease mutation identification, computer architecture; parallel processing; distributed computing; software engineering.. 

Present Research Interests:Bioinformatics, computational biology, genome sequence analysis, software tools for human disease mutation identification, computer architecture; parallel processing; distributed computing; software engineering.

Selected Publications:

  • Braun, T., Scheetz, T., Webster, G., Clark, A., Stone, E., Sheffield, V., and Casavant, T., "Identifying Candidate Disease Genes with High-Performance Computing, " Supercomputing, Vol. 26, pp. 7-24, 2003.
  • Tuggle, C.K., Gree, J.A., ... Casavant, T.L., et. al., "EST-Based Gene Discovery in Pig: Virtual Expression Patterns and Comparative Mapping to Human." Mammalian Genome, Vol. 14, pp. 565-579, 2003.
  • Chiang, A.P., Nishimura, D., ... Casavant, T., et. al., "Comparative Genomic Analysis Identifies an ADP=Ribosylation Factor-like Gene as the Cause of Bardet-Biedl Syndrome (BBS3)," Am. J. Hum. Genet., Vol. 75, pp. 475-484, 2004.
  • Stone, E.M., Braun, T.A., Russell, S.R., Kuehn, M., Lotery, A.J., Moor, P.A., Eastman, C.G., Casavant, T.L., and Sheffield. V.C., "Missense Varation in the Fibulin 5 Gene and Age-Related Macular Degeneration," New England Journal of Medicine, Vol 351, pp. 346-353, 2004.
  • Hackett, J.D., Scheetz, T.E., Yoon, H.S., Soares, M.B., Bonaldo. M.F., Casavant, T.L., and Bhattacharya, D., "Insights in to a Dinoflagellate Genome Through Expressed SEquence Tag Analysis," BMC Genomics, Vol. 6(1), p. 80, May 29, 2005.

Active Scientific and Professional Society Memberships: Institute of Electrical and Electronical Engineers Computer Society; Association for Computer Machinery. 

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